PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2YKL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	94.5	CDRLenMismatch	-1.0	H1	9	H1-9-*	-1	TVSGGSIWG
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	94.5	Hu_IGHV4-59*05	77.8	H2	9	H2-9-1	10	SIYSSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	94.5	Hu_IGHV4-59*05	0.0	H3	15	H3-15-*	-1	VAWFGDlLSLKGVEL
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	94.5	Hu_IGHV4-59*05	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L1	13	L1-13-1	5	SGSSSNIGSNYVY	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L2	8	L2-8-1	8	YRNNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	88.9	L3	11	L3-11-1	8	AAWDDSLSAWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	98.5	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	13	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022