PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2Y6S

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	100.0	L1	15	L1-15-*	-1	RASKSVStsgySYMH	BBABBABBBEBBBBB
C	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	7	YLVSNLES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	57.1	L3	9	L3-9-cis7-1	25	QHIAELTRT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	84.6	H1	13	H1-13-1	13	KASGYTFTDYVIS	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	50.0	H2	10	H2-10-1	12	EFYPGTDSTY	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	50.0	H3	6	H3-6-2	16	ATAFDY	BBLLAB
D	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	87.5	H4	8	H4-8-1	11	ADKSSKTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	84.6	H1	13	H1-13-1	13	KASGYTFTDYVIS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	50.0	H2	10	H2-10-1	12	EFYPGTDSTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	50.0	H3	6	H3-6-2	16	ATAFDY	BBLLAB
H	heavy	Mus.musculus	Mo_IGHV1-77*01	89.0	Mo_IGHV1-77*01	87.5	H4	8	H4-8-1	10	ADKSSKTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	100.0	L1	15	L1-15-*	-1	RASKSVStsgySYMH	BBABBABBBEBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	87.5	L2	8	L2-8-1	7	YLVSNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	57.1	L3	9	L3-9-cis7-1	25	QHIAELTRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	95.7	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022