PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2XV6

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	Al_IGHV3S57*01_VHH	53.8	H1	13	H1-13-*	-1	AASGSFFMSNVMA	BBBLBBABBABBB
B	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-3	11	AIRGGDMSTV	BBBBEALBBB
B	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	Al_IGHV3S57*01_VHH	0.0	H3	6	H3-6-*	-1	KASGSS	BBBLBB
B	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	Al_IGHV3S57*01_VHH	62.5	H4	8	H4-8-1	10	RDDDKNIL	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	Al_IGHV3S57*01_VHH	53.8	H1	13	H1-13-*	-1	AASGSFFMSNVMA	BBBLBBABBABBB
D	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-3	12	AIRGGDMSTV	BBBBEALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	Al_IGHV3S57*01_VHH	0.0	H3	6	H3-6-*	-1	KASGSS	BBBLBB
D	heavy	Vicugna.pacos	Al_IGHV3S57*01_VHH	86.3	Al_IGHV3S57*01_VHH	62.5	H4	8	H4-8-1	7	RDDDKNIL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022