PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2X1P

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AAsgrtftSFAMG
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	9	SISRSGTLTR	BBBAALABBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AADLHrpygpgTQRSDEYDS
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	12	VDNAKNTV	BBAAALBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AAsgrtftSFAMG
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	SISRSGTLTR	BBBAALABBB
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AADLHrpygpgTQRSDEYDS
B	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	13	VDNAKNTV	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AAsgrtftSFAMG
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	SISRSGTLTR	BBBAALABBB
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AADLHrpygpgTQRSDEYDS
C	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	13	VDNAKNTV	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	61.5	H1	13	H1-13-*	-1	AAsgrtftSFAMG
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	10	SISRSGTLTR	BBBAALABBB
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	50.0	H3	20	H3-20-*	-1	AADLHrpygpgTQRSDEYDS
D	heavy	Lama.glama	La_IGHV1S3*01_VHH	86.3	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	12	VDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022