PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2VYR

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	9	AASGFTFEEYAML	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	10	GINARGYTTY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
E	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	9	AASGFTFEEYAML	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	11	GINARGYTTY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
F	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	10	AASGFTFEEYAML	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	10	GINARGYTTY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
G	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	8	AASGFTFEEYAML	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	11	GINARGYTTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
H	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	10	AASGFTFEEYAML	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	12	GINARGYTTY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
I	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	10	AASGFTFEEYAML	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	11	GINARGYTTY	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
J	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	10	AASGFTFEEYAML	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	11	GINARGYTTY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
K	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
L	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	10	AASGFTFEEYAML	BBBLBBAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	40.0	H2	10	H2-10-2	10	GINARGYTTY	BBBAALABBB
L	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H3	17	H3-17-*	-1	AKPWYpfmASKGSEFDY
L	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022