PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2VXT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	84.6	H1	13	H1-13-1	8	KASGYSFTDYFIY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	80.0	H2	10	H2-10-1	6	DIDPYNGDTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	100.0	H3	6	H3-6-2	11	ARGLRF	BBLLAB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	93.2	Mo_IGHV1S135*01	75.0	H4	8	H4-8-1	11	VDQSSTTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	81.8	L1	11	L1-11-1	6	RASQDIGSKLY	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L2	8	L2-8-1	4	YATSSLDS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L3	9	L3-9-cis7-1	6	LQYASSPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV9-120*01	98.6	Mo_IGKV9-120*01	100.0	L4	6	L4-6-2	8	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022