PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2VWE

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	90.9	L1	11	L1-11-2	13	RASQDISNFLN	BBABBALLBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	87.5	L2	8	L2-8-*	-1	YYTSTLHS	ABABBBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	16	QQGKTLPPT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	20	GSGTDY	EBEABB
E	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	76.9	H1	13	H1-13-1	13	KASGYTFTGFWIH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	80.0	H2	10	H2-10-1	10	HINPGNGGTN	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	100.0	H3	13	H3-13-*	-1	ARSYSNYVRAMDY	BBBBEAAALBBAB
E	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	100.0	H4	8	H4-8-1	8	VDKSSSTA	BBAAALBB
J	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	90.9	L1	11	L1-11-2	9	RASQDISNFLN	BBABBALLBBB
J	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	87.5	L2	8	L2-8-*	-1	YYTSTLHS	ABABBBBB
J	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	15	QQGKTLPPT	BBAABBbBB
J	kappa	Mus.musculus	Mo_IGKV10-96*02	98.6	Mo_IGKV10-96*02	100.0	L4	6	L4-6-*	-1	GSGTDY	EABABB
L	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	76.9	H1	13	H1-13-1	16	KASGYTFTGFWIH	BBBLBBAAABBBB
L	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	80.0	H2	10	H2-10-1	9	HINPGNGGTN	BBBAAALBBB
L	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	100.0	H3	13	H3-13-*	-1	ARSYSNYVRAMDY	BBBABAAALBBAB
L	heavy	Mus.musculus	Mo_IGHV1-53*01	97.3	Mo_IGHV1-53*01	100.0	H4	8	H4-8-*	-1	VDKSSSTA	BBABLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022