PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2VIR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-1	15	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-*	-1	GGTNNRAP	BLLABBBA
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-1	18	ALWYSNHWV	BBBBLLBBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	18	LIGDKA	BBEABB
B	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	76.9	H1	13	H1-13-1	16	TVSGFLLISNGVH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	88.9	H2	9	H2-9-1	10	VIWAGGNTN	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	100.0	H3	16	H3-16-*	-1	ARDFYDYdvFYYAMDY
B	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	100.0	H4	8	H4-8-1	12	KDNSKSQV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022