PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2UZI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	84.6	H1	13	H1-13-1	11	AASGFTFSTFSMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	70.0	H2	10	H2-10-2	10	YISRTSKTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	100.0	H3	8	H3-8-2	5	ARGRFFDY	BBEAALAB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	95.9	Hu_IGHV3-48*01	75.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.5	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	8	RASQSISSYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.5	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	13	YSASVLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.5	Hu_IGKV1-39*01	57.1	L3	9	L3-9-cis7-1	22	QQSVMIPMT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.5	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022