PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2R56

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	61.5	H1	13	H1-13-1	10	TASGFTFRHHGMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	20.0	H2	10	H2-10-2	11	SLSGSGTKTH	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	100.0	H3	14	H3-14-*	-1	AKAKRVGATGYFDL	BBBABABBALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	87.5	H4	8	H4-8-*	-1	RDNSNNTL	BBBAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	61.5	H1	13	H1-13-1	10	TASGFTFRHHGMT	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	20.0	H2	10	H2-10-2	11	SLSGSGTKTH	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	100.0	H3	14	H3-14-*	-1	AKAKRVGATGYFDL	BBBABABBALBBAB
I	heavy	Homo.sapiens	Hu_IGHV3-30*18	86.3	Hu_IGHV3-30*18	87.5	H4	8	H4-8-*	-1	RDNSNNTL	BBBAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	90.9	L1	11	L1-11-1	8	RASQGISSRLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	100.0	L2	8	L2-8-1	8	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	85.7	L3	9	L3-9-cis7-1	7	QQYHSYPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	83.3	L4	6	L4-6-1	8	GSGTEF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	90.9	L1	11	L1-11-1	7	RASQGISSRLA	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	100.0	L2	8	L2-8-1	10	YAASSLQS	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	85.7	L3	9	L3-9-cis7-1	8	QQYHSYPWT	BBAABBbBB
M	kappa	Homo.sapiens	Hu_IGKV1D-16*01	94.2	Hu_IGKV1D-16*01	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022