PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2QSC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-64*01	87.7	Hu_IGHV3-64*01	76.9	H1	13	H1-13-1	10	AAFGFNFSSYVMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-64*01	87.7	Hu_IGHV3-64*01	70.0	H2	10	H2-10-2	11	AISSDGETTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-64*01	87.7	Hu_IGHV3-64*01	100.0	H3	16	H3-16-*	-1	ARDRYYETsgSNAFDV
H	heavy	Homo.sapiens	Hu_IGHV3-64*01	87.7	Hu_IGHV3-64*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.9	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	7	QASQDISNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.9	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	11	YTASNLET	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.9	Hu_IGKV1-33*01	85.7	L3	10	L3-10-*	-1	QQYDNLgdLS	BBBABAAABB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	87.9	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	11	GSGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022