PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2QQN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	14	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H2	10	H2-10-4	28	QISPAGGYTN	BBBBLLBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARGElpYYRMSKVMDV
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	6	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.6	Hu_IGKV1-12*01	72.7	L1	11	L1-11-2	11	RASQYFSSYLA	BBABBALLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.6	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	5	YGASSRAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.6	Hu_IGKV1-12*01	42.9	L3	9	L3-9-cis7-1	16	QQYLGSPPT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.6	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022