PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2QHR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV3-23*04	80.8	Hu_IGHV3-23*04	84.6	H1	13	H1-13-1	6	AASGFAFSSYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV3-23*04	80.8	Hu_IGHV3-23*04	60.0	H2	10	H2-10-2	7	YISRGGGYTY	BBBAALABBB
H	heavy	Mus.musculus	Hu_IGHV3-23*04	80.8	Hu_IGHV3-23*04	0.0	H3	16	H3-16-*	-1	SRHIYYgsSHYYAMDY
H	heavy	Mus.musculus	Hu_IGHV3-23*04	80.8	Hu_IGHV3-23*04	87.5	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	79.4	Hu_IGLV4-69*01	58.3	L1	12	L1-12-*	-1	TLSRQHSTYTIE	BBBAAAAABBBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	79.4	Hu_IGLV4-69*01	66.7	L2	12	L2-12-2	5	ELKKdgshSTGD	BBBAALBBBBBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	79.4	Hu_IGLV4-69*01	14.3	L3	13	L3-13-*	-1	GVGDTIKEQfvYV	BBBBBBLLBBBBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	79.4	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	15	SSGADR	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022