PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2Q8B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	69.2	H1	13	H1-13-1	15	IVSGFKIKDTSMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	70.0	H2	10	H2-10-1	13	RIDPANDNSE	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	0.0	H3	5	H3-5-*	-1	TLSHF	BBEAB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	7	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	95.6	Mo_IGKV6-32*01	90.9	L1	11	L1-11-1	8	KASQSVSNDVV	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	95.6	Mo_IGKV6-32*01	87.5	L2	8	L2-8-1	5	YYASIRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	95.6	Mo_IGKV6-32*01	71.4	L3	9	L3-9-cis7-1	18	QQGFSSPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-32*01	95.6	Mo_IGKV6-32*01	100.0	L4	6	L4-6-1	14	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022