PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2Q1E

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDINNYLI	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	6	YDASTLET	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	11	QQYDNlPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GSGTEF	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDINNYLI	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	16	YDASTLET	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	17	QQYDNlPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	6	QASQDINNYLI	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	4	YDASTLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	17	QQYDNlPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	12	GSGTEF	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	7	QASQDINNYLI	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	7	YDASTLET	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	16	QQYDNlPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	13	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022