PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2OZ4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.8	Mo_IGHV1S113*01	84.6	H1	13	H1-13-1	11	KTSGYTFSEFTMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.8	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	14	GINTINGGSS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.8	Mo_IGHV1S113*01	0.0	H3	7	H3-7-*	-1	ATKGFAY	BBLLLAB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.8	Mo_IGHV1S113*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-48*01	95.7	Mo_IGKV5-48*01	100.0	L1	11	L1-11-1	12	RASQSIGTSIH	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV5-48*01	95.7	Mo_IGKV5-48*01	87.5	L2	8	L2-8-1	13	EYASESIS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV5-48*01	95.7	Mo_IGKV5-48*01	85.7	L3	9	L3-9-cis7-1	5	QQSNVWPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-48*01	95.7	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022