PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2OJZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	Mo_IGHV1-84*02	92.3	H1	13	H1-13-1	10	KASGYTFTDYYMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	WVYPGSIK
H	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	Mo_IGHV1-84*02	50.0	H3	11	H3-11-*	-1	TRWTYGSSFDY	BBBBAAAEBAB
H	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	Mo_IGHV1-84*02	62.5	H4	8	H4-8-1	10	ADTSSSIV	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	Mo_IGHV1-84*02	92.3	H1	13	H1-13-1	9	KASGYTFTDYYMN	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	WVYPGSIK
I	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	Mo_IGHV1-84*02	50.0	H3	11	H3-11-*	-1	TRWTYGSSFDY	BBBBAAAEBAB
I	heavy	Mus.musculus	Mo_IGHV1-84*02	82.2	Mo_IGHV1-84*02	62.5	H4	8	H4-8-1	12	ADTSSSIV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	13	RSSQSIvhsngNTYLE	BBAEBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	85.7	L3	9	L3-9-cis7-1	12	FQGSHIPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	14	RSSQSIvhsngNTYLE	BBAEBABBAALBBBBB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	85.7	L3	9	L3-9-cis7-1	12	FQGSHIPLT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022