PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2MPA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-5*01	90.4	Mo_IGHV1-5*01	76.9	H1	13	H1-13-1	14	KASGYSFTSYWLH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	90.4	Mo_IGHV1-5*01	70.0	H2	10	H2-10-1	16	GIYPGNRDTR	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	90.4	Mo_IGHV1-5*01	0.0	H3	14	H3-14-*	-1	SIIYFDYADFIMDY	BBBBAABAABBBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	90.4	Mo_IGHV1-5*01	87.5	H4	8	H4-8-1	13	AVTSANTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	93.8	L1	16	L1-16-1	9	RSSQALvhsngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	8	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	14	SQSTHVPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022