PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2MCP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV7-1*02	100.0	Mo_IGHV7-1*02	100.0	H1	13	H1-13-1	20	ATSGFTFSDFYME	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV7-1*02	100.0	Mo_IGHV7-1*02	83.3	H2	12	H2-12-*	-1	ASRNKgnKYTTE	BBBBBABEBBBB
H	heavy	Mus.musculus	Mo_IGHV7-1*02	100.0	Mo_IGHV7-1*02	50.0	H3	13	H3-13-*	-1	ARNYYGSTWYFDV	BBBBBAABBBBAB
H	heavy	Mus.musculus	Mo_IGHV7-1*02	100.0	Mo_IGHV7-1*02	100.0	H4	8	H4-8-1	11	RDTSQSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-28*01	98.6	Mo_IGKV8-28*01	94.1	L1	17	L1-17-*	-1	KSSQSLlnsgnqKNFLA	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-28*01	98.6	Mo_IGKV8-28*01	100.0	L2	8	L2-8-4	13	YGASTRES	BEAABBBB
L	kappa	Mus.musculus	Mo_IGKV8-28*01	98.6	Mo_IGKV8-28*01	100.0	L3	9	L3-9-cis7-1	14	QNDHSYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-28*01	98.6	Mo_IGKV8-28*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022