PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2JEL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S137*01	95.9	Mo_IGHV1S137*01	92.3	H1	13	H1-13-1	8	KGSGYTFTTYAMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	95.9	Mo_IGHV1S137*01	50.0	H2	10	H2-10-1	9	LISTYSGYTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	95.9	Mo_IGHV1S137*01	100.0	H3	11	H3-11-*	-1	ARVMGEQYFDV	BBBBEABABAB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	95.9	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	10	RSSQSIvhgngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	8	YKISNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	9	FQGSHVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022