PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2JB6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	85.7	L1	14	L1-14-2	13	TGTSSDVGSnNYVS	BBBAAAAAABABBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	75.0	L2	8	L2-8-1	7	YGGSNRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	22.2	L3	11	L3-11-2	21	RSWDSNLSYSV	BBBBAALABBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	27	KSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	84.6	H1	13	H1-13-*	-1	KAsggtfSNYAIN
B	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	70.0	H2	10	H2-10-6	14	NIEPYFGTAN	BBBABLLBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H3	13	H3-13-*	-1	ARYFMSYKHLSDY	BBBBBAALBBBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	11	ADESTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	84.6	H1	13	H1-13-*	-1	KAsggtfsNYAIN
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	70.0	H2	10	H2-10-6	20	NIEPYFGTAN	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H3	13	H3-13-*	-1	ARYFMSYKHLSDY	BBBBBABLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	12	ADESTSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	85.7	L1	14	L1-14-2	15	TGTSSDVGSnNYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	75.0	L2	8	L2-8-1	9	YGGSNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	22.2	L3	11	L3-11-2	19	RSWDSNLSYSV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	19	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022