PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2JB5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	84.6	H1	13	H1-13-*	-1	KASGGTFSNYAIN	BBABBBABBBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	70.0	H2	10	H2-10-1	21	NIEPYFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H3	13	H3-13-*	-1	ARYFMSYKHLSDY	BBBBBABLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	14	ADESTSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	85.7	L1	14	L1-14-2	17	TGTSSDVGSnNYVS	BBBAAAAAAEABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	75.0	L2	8	L2-8-1	10	YGGSNRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	22.2	L3	11	L3-11-2	17	RSWDSNLSYSV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	100.0	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	12	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022