PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2IQA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	6	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	9	FQGSHVPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	80.0	H1	15	H1-15-*	-1	SLSGFSLRTSGMgvG	BBBLBBAABBbBBBB
B	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	77.8	H2	9	H2-9-1	11	HIWWDDDKN	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	0.0	H3	15	H3-15-*	-1	VRRAHNvVLGDWFAY
B	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	100.0	H4	8	H4-8-1	4	KDTSRNQV	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	80.0	H1	15	H1-15-*	-1	SLSGFSLRTSGMgvG	BBBLBBAABBbBBBB
H	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	77.8	H2	9	H2-9-1	13	HIWWDDDKN	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	0.0	H3	15	H3-15-*	-1	VRRAHNvVLGDWFAY
H	heavy	Mus.musculus	Mo_IGHV8S9*01	95.8	Mo_IGHV8S9*01	100.0	H4	8	H4-8-1	8	KDTSRNQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	6	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	5	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	11	FQGSHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022