PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2IPU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	93.3	H1	15	H1-15-1	11	SFSGFSLSTSGMgvG	BBBLBBAABBLBBBB
G	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	66.7	H2	9	H2-9-1	11	HIWWDDDRS	BBBAALBBB
G	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	66.7	H3	15	H3-15-*	-1	VRRAHTTvLGDWFAY
G	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	75.0	H4	8	H4-8-1	8	KDAARNQV	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	93.3	H1	15	H1-15-1	10	SFSGFSLSTSGMgvG	BBBLBBAABBLBBBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	66.7	H2	9	H2-9-1	12	HIWWDDDRS	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	66.7	H3	15	H3-15-*	-1	VRRAHTTvLGDWFAY
H	heavy	Mus.musculus	Mo_IGHV8-12*01	91.8	Mo_IGHV8-12*01	75.0	H4	8	H4-8-1	9	KDAARNQV	BBAAALBB
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	5	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLEABBBB
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	8	FQGSHVPLT	BBAABBbBB
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	6	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	4	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	8	FQGSHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022