PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2HKF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV10-1*02	97.3	Mo_IGHV10-1*02	61.5	H1	13	H1-13-*	-1	VVSGSTLNNYAMN	BBBLBBEAABBBB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	97.3	Mo_IGHV10-1*02	100.0	H2	12	H2-12-1	7	RIRSKsnNYATY	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	97.3	Mo_IGHV10-1*02	50.0	H3	10	H3-10-*	-1	VTYGNHPFAY	BBBBABBLAB
H	heavy	Mus.musculus	Mo_IGHV10-1*02	97.3	Mo_IGHV10-1*02	87.5	H4	8	H4-8-1	14	RDDSQSMI	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L1	16	L1-16-1	6	RSSQSLvhsngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	9	SQSTHVPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022