PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2H9G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	8	RASQDVSTAVA	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	5	YSASFLYS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	7	QQSYTTPPT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV1-66*01	46.2	H1	13	H1-13-*	-1	AASGFSIGKSGIH	BBBLBBAAABEBB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV1-66*01	60.0	H2	10	H2-10-1	8	VIYPHDGNTA	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	13	H3-13-*	-1	ARRLALVRMWMDY	BBBABAABABBBL
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	4	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV1-66*01	46.2	H1	13	H1-13-*	-1	AASGFSIGKSGIH	BBBLBBAAABEBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV1-66*01	60.0	H2	10	H2-10-1	10	VIYPHDGNTA	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	13	H3-13-*	-1	ARRLALVRMWMDY	BBBABAABABBBL
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	10	RASQDVSTAVA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	6	YSASFLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	9	QQSYTTPPT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022