PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2H1P

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	97.2	Mo_IGHV5-6-2*01	84.6	H1	13	H1-13-1	22	AASGFTFSSYFLS	BBBLEBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	97.2	Mo_IGHV5-6-2*01	70.0	H2	10	H2-10-*	-1	TINSNGDKTY	BBBBLBABBB
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	97.2	Mo_IGHV5-6-2*01	100.0	H3	13	H3-13-*	-1	ARRDSSASLYFDY	BBBBAALALBBAB
H	heavy	Mus.musculus	Mo_IGHV5-6-2*01	97.2	Mo_IGHV5-6-2*01	100.0	H4	8	H4-8-1	22	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L1	16	L1-16-*	-1	RSSQSLvhsngNTYLH	BBABBABBBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	11	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	19	SQSTHVPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022