PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2G60

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Mo_IGHV1-4*01	79.5	Mo_IGHV1-4*01	69.2	H1	13	H1-13-1	6	KSSGYTFTAYAIH	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Mo_IGHV1-4*01	79.5	Mo_IGHV1-4*01	40.0	H2	10	H2-10-1	13	YIAPAAGAAA	BBBAAALBBB
H	heavy	Rattus.norvegicus	Mo_IGHV1-4*01	79.5	Mo_IGHV1-4*01	100.0	H3	10	H3-10-*	-1	ARAAAAGADY	BBBAABBBAB
H	heavy	Rattus.norvegicus	Mo_IGHV1-4*01	79.5	Mo_IGHV1-4*01	100.0	H4	8	H4-8-1	8	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	12	RSSQAIvhangNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	5	YKVANRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	71.4	L3	9	L3-9-cis7-1	11	FQGAHAPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022