PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2G2R

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	81.2	L1	16	L1-16-1	7	RSSQSLlyingKTHLN	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	6	YLVSKLDS	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	71.4	L3	9	L3-9-cis7-1	9	LQSTHFPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	100.0	L4	6	L4-6-2	15	GSGTDF	BBEABB
B	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	92.3	H1	13	H1-13-1	11	KASGYTFTAYYMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	80.0	H2	10	H2-10-1	9	VINPYNGFTT	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	0.0	H3	11	H3-11-*	-1	VPYDYAADRVY	BBBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	87.5	H4	8	H4-8-1	9	VDKSSNTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	92.3	H1	13	H1-13-1	11	KASGYTFTAYYMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	80.0	H2	10	H2-10-1	8	VINPYNGFTT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	0.0	H3	11	H3-11-*	-1	VPYDYAADRVY	BBBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-19*01	89.0	Mo_IGHV1-19*01	87.5	H4	8	H4-8-1	9	VDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	81.2	L1	16	L1-16-1	8	RSSQSLlyingKTHLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	6	YLVSKLDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	71.4	L3	9	L3-9-cis7-1	8	LQSTHFPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	95.7	Mo_IGKV1-133*01	100.0	L4	6	L4-6-2	15	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022