PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2FBJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	7	AASGFDFSKYWMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	80.0	H2	10	H2-10-2	15	EIHPDSGTIN	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	100.0	H3	11	H3-11-*	-1	ARLHYYGYNAY	BBBBBLLBBAB
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	87.5	H4	8	H4-8-*	-1	RDNAKNSL	BALAALBB
L	kappa	Mus.musculus	Mo_IGKV4-86*01	97.1	Mo_IGKV4-86*01	80.0	L1	10	L1-10-1	9	SASSSVSSLH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-86*01	97.1	Mo_IGKV4-86*01	100.0	L2	8	L2-8-*	-1	YEISKLAS	BLEABBBA
L	kappa	Mus.musculus	Mo_IGKV4-86*01	97.1	Mo_IGKV4-86*01	85.7	L3	9	L3-9-*	-1	QQWTYPLIT	BBBBBaBBB
L	kappa	Mus.musculus	Mo_IGKV4-86*01	97.1	Mo_IGKV4-86*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022