PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2DQT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	93.2	Mo_IGHV5-6-5*01	92.3	H1	13	H1-13-1	10	AASGFTFSNYAMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	93.2	Mo_IGHV5-6-5*01	88.9	H2	9	H2-9-1	8	SISSGGSIY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	93.2	Mo_IGHV5-6-5*01	100.0	H3	16	H3-16-*	-1	ARVSHYdgSRDWYFDV
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	93.2	Mo_IGHV5-6-5*01	100.0	H4	8	H4-8-1	5	RDNARNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	81.2	L1	16	L1-16-1	6	RSSQTIvhsngDTYLD	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	9	FQGSHVPPT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022