PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2CMR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	92.3	H1	13	H1-13-*	-1	KASGDTFSSYAIS	BBBAAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	11	GIIPIFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	100.0	H3	12	H3-12-1	14	ARDNPTLLGSDY	BBBBAAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	13	ANESTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	63.6	L1	11	L1-11-1	4	RASEGIYHWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	3	YKASSLAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-cis7-1	8	QQYSNYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	83.3	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022