PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2CJU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	84.6	H1	13	H1-13-1	14	ATSGFTFTNYYMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	83.3	H2	12	H2-12-1	9	SIRNKanGYTTD	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	66.7	H3	12	H3-12-*	-1	ARGYGYGAWFAY	BBBBAALBBLAB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	8	RDNSQSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	13	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	BLLLBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	11	FQGSHVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022