PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2BJM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	90.0	H2	10	H2-10-*	-1	RIDPNGGGTK	BBBAAAEBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARMWYYGTYYFDY	BABELALBBEBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	98.3	Mo_IGHV1S65*01	100.0	H4	8	H4-8-1	25	VDKPSSTA	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-1	6	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	8	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	9	ALWYSNHLV	BBBBEABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	17	LIGNKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022