PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2AK1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	78.6	H1	14	H1-14-2	10	TVTGYSITtNYAWT	BBBLBBAABBBBBB
H	heavy	Rattus.norvegicus	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	44.4	H2	9	H2-9-*	-1	YIRSSVITR	BBBLLABBB
H	heavy	Rattus.norvegicus	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	100.0	H3	12	H3-12-*	-1	ARYDYYGNTGDY	BBBBAALBAEAB
H	heavy	Rattus.norvegicus	Mo_IGHV3-2*02	94.5	Mo_IGHV3-2*02	87.5	H4	8	H4-8-1	8	QDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-112*01	100.0	Mo_IGKV2-112*01	87.5	L1	16	L1-16-1	7	RSSRSLlykdgRTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-112*01	100.0	Mo_IGKV2-112*01	100.0	L2	8	L2-8-1	5	YLMSTRAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV2-112*01	100.0	Mo_IGKV2-112*01	85.7	L3	9	L3-9-cis7-1	26	QQFVEYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-112*01	100.0	Mo_IGKV2-112*01	100.0	L4	6	L4-6-3	13	GSGTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022