PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2AEP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV7-3*02	91.8	Mo_IGHV7-3*02	92.3	H1	13	H1-13-1	9	ATSGFTFIDYYMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	91.8	Mo_IGHV7-3*02	75.0	H2	12	H2-12-1	6	LIRNKGNgyTME	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	91.8	Mo_IGHV7-3*02	66.7	H3	11	H3-11-*	-1	ARVDYGTNYDY	BBBBLEABBAB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	91.8	Mo_IGHV7-3*02	87.5	H4	8	H4-8-1	7	RDNSQSIV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L1	11	L1-11-1	6	KASQNVGTNVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L2	8	L2-8-*	-1	YSASYRYS	ABAABBBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	71.4	L3	9	L3-9-cis7-1	8	QQFNRYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	92.8	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022