PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2ADJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	100.0	L1	11	L1-11-1	8	ITSTDIDDDMN	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	100.0	L2	8	L2-8-*	-1	SEGNTLRP	BBLLBBBB
A	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	85.7	L3	9	L3-9-cis7-1	18	LQSDTLPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	100.0	L4	6	L4-6-1	18	GYGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	97.3	Mo_IGHV5-6*01	100.0	H1	13	H1-13-1	13	AASGFTFSSYGMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	97.3	Mo_IGHV5-6*01	100.0	H2	10	H2-10-2	7	TISSGGSYTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	97.3	Mo_IGHV5-6*01	100.0	H3	13	H3-13-*	-1	ARHEDGNWNYFDY	BBBABABBBBBAB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	97.3	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	8	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022