PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2A6K

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	16	RASQDISNYLN	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L2	8	L2-8-*	-1	YYTSRLHS	BLLEEBBA
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	9	QQGNTLPRT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	14	GSGTDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	92.3	H1	13	H1-13-1	12	KASGYTFTSYGIN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	70.0	H2	10	H2-10-1	12	YINPGNGYTK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	100.0	H3	14	H3-14-*	-1	ARSVYYGGSYYFDY	BBBBABLLEBBBAB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	75.0	H4	8	H4-8-*	-1	VDKSSSTA	BBBAALBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	92.3	H1	13	H1-13-1	13	KASGYTFTSYGIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	70.0	H2	10	H2-10-1	18	YINPGNGYTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	100.0	H3	14	H3-14-*	-1	ARSVYYGGSYYFDY	BBBBBAEEBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	75.0	H4	8	H4-8-1	20	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	10	RASQDISNYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L2	8	L2-8-*	-1	YYTSRLHS	BLLEEBBA
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	12	QQGNTLPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	14	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022