PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2A6J

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	16	RASQDISNYLN	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L2	8	L2-8-*	-1	YYTSRLHS	BLLELBBA
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	11	QQGNTLPRT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	14	GSGTDY	EEEABB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	92.3	H1	13	H1-13-1	15	KASGYTFTSYGIN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	70.0	H2	10	H2-10-*	-1	YINPGNGYTK	BBBBEAEEBE
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	100.0	H3	14	H3-14-*	-1	ARSVYYGGSYYFDY	BBBBAEBEBBBBAB
B	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	75.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	92.3	H1	13	H1-13-1	13	KASGYTFTSYGIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	70.0	H2	10	H2-10-*	-1	YINPGNGYTK	BBBAABAEEE
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	100.0	H3	14	H3-14-2	13	ARSVYYGGSYYFDY	BBBBBBLLBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-58*01	91.8	Mo_IGHV1-58*01	75.0	H4	8	H4-8-1	24	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	9	RASQDISNYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L2	8	L2-8-*	-1	YYTSRLHS	BLEBABBA
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	15	QQGNTLPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	100.0	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	14	GSGTDY	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022