PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1ZVO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
A	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	76.9	L1	13	L1-13-*	-1	FGSSSNIGRYYVY
A	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	75.0	L2	8	L2-8-*	-1	YKDNQRPS
A	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	77.8	L3	9	L3-9-*	-1	AAWDDSLWV
A	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	100.0	L4	6	L4-6-*	-1	KSGTSA
B	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	76.9	L1	13	L1-13-*	-1	FGSSSNIGRYYVY
B	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	75.0	L2	8	L2-8-*	-1	YKDNQRPS
B	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	77.8	L3	9	L3-9-*	-1	AAWDDSLWV
B	lambda	Homo.sapiens	Hu_IGLV1-47*02	98.5	Hu_IGLV1-47*02	100.0	L4	6	L4-6-*	-1	KSGTSA
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	60.0	H1	15	H1-15-*	-1	IVSGGPIrrTGYYWG
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	55.6	H2	9	H2-9-*	-1	GVYYTGSIY
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	100.0	H3	21	H3-21-*	-1	ARGNpppyydiGTGSDDGIDV
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	87.5	H4	8	H4-8-*	-1	VDTSRNQF
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	60.0	H1	15	H1-15-*	-1	IVSGGPIrrTGYYWG
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	55.6	H2	9	H2-9-*	-1	GVYYTGSIY
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	100.0	H3	21	H3-21-*	-1	ARGNpppyydiGTGSDDGIDV
D	heavy	Homo.sapiens	Hu_IGHV4-39*01	88.9	Hu_IGHV4-39*01	87.5	H4	8	H4-8-*	-1	VDTSRNQF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022