PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1ZTX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-9*01	87.7	Mo_IGHV1-9*01	84.6	H1	13	H1-13-1	12	KATGYTFSDYWIE	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-9*01	87.7	Mo_IGHV1-9*01	50.0	H2	10	H2-10-1	11	DILCGTGRTR	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-9*01	87.7	Mo_IGHV1-9*01	100.0	H3	12	H3-12-*	-1	ARSASYGDYADY	BBBBAAEABBAB
H	heavy	Mus.musculus	Mo_IGHV1-9*01	87.7	Mo_IGHV1-9*01	100.0	H4	8	H4-8-1	12	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	100.0	L1	11	L1-11-2	10	KASQDVSTAVA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	87.5	L2	8	L2-8-1	9	SWASTRHT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	85.7	L3	9	L3-9-cis7-1	9	QQHYTTPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-25*01	100.0	Mo_IGKV6-25*01	100.0	L4	6	L4-6-1	15	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022