PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1ZAN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Ra_IGHV2-30*01	90.4	Ra_IGHV2-30*01	76.9	H1	13	H1-13-1	16	TVSGFSLTNNNVN	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Ra_IGHV2-30*01	90.4	Ra_IGHV2-30*01	55.6	H2	9	H2-9-1	10	GVWAGGATD	BBBAALBBB
H	heavy	Rattus.norvegicus	Ra_IGHV2-30*01	90.4	Ra_IGHV2-30*01	100.0	H3	16	H3-16-*	-1	ARDGGYSssTLYAMDA
H	heavy	Rattus.norvegicus	Ra_IGHV2-30*01	90.4	Ra_IGHV2-30*01	100.0	H4	8	H4-8-1	6	RDTSKSQV	BBAAALBB
L	kappa	Rattus.norvegicus	Ra_IGKV12S36*01	100.0	Ra_IGKV12S36*01	90.9	L1	11	L1-11-2	4	RASEDIYNALA	BBABBALLBBB
L	kappa	Rattus.norvegicus	Ra_IGKV12S36*01	100.0	Ra_IGKV12S36*01	62.5	L2	8	L2-8-1	5	YNTDTLHT	BLLABBBB
L	kappa	Rattus.norvegicus	Ra_IGKV12S36*01	100.0	Ra_IGKV12S36*01	57.1	L3	9	L3-9-cis7-1	14	QHYFGYPRT	BBAABBbBB
L	kappa	Rattus.norvegicus	Ra_IGKV12S36*01	100.0	Ra_IGKV12S36*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022