PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1Z3G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	100.0	H1	13	H1-13-1	20	KASGYTFTSYWMH	BBBLEBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	90.0	H2	10	H2-10-1	11	MIHPHSGSTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	100.0	H3	8	H3-8-*	-1	ARGWDVAY	BBEAALBL
H	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	100.0	H4	8	H4-8-1	22	VDKSSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	100.0	H1	13	H1-13-1	22	KASGYTFTSYWMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	90.0	H2	10	H2-10-1	13	MIHPHSGSTN	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	100.0	H3	8	H3-8-*	-1	ARGWDVAY	BBEAALBL
I	heavy	Mus.musculus	Mo_IGHV1-64*01	100.0	Mo_IGHV1-64*01	100.0	H4	8	H4-8-1	23	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	90.0	L1	10	L1-10-1	17	SASSSVSYMN	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	8	YDTSKLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	100.0	L3	9	L3-9-cis7-1	20	QQWSSNPPT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB
M	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	90.0	L1	10	L1-10-1	13	SASSSVSYMN	BBABBBABBB
M	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	10	YDTSKLAS	BLEABBBB
M	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	100.0	L3	9	L3-9-cis7-1	16	QQWSSNPPT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022