PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1YEJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-76*01	87.7	Mo_IGHV1-76*01	61.5	H1	13	H1-13-1	6	KTSGYIFTSYWIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-76*01	87.7	Mo_IGHV1-76*01	80.0	H2	10	H2-10-1	7	RIYPGTGSTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-76*01	87.7	Mo_IGHV1-76*01	50.0	H3	16	H3-16-*	-1	TRWGFipVREDYVMDY
H	heavy	Mus.musculus	Mo_IGHV1-76*01	87.7	Mo_IGHV1-76*01	87.5	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	94.2	Mo_IGKV1-133*01	100.0	L1	16	L1-16-1	4	KSSQSLlysngKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	94.2	Mo_IGKV1-133*01	87.5	L2	8	L2-8-1	4	HLVSKLDS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	94.2	Mo_IGKV1-133*01	100.0	L3	9	L3-9-cis7-1	8	VQGTHFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-133*01	94.2	Mo_IGKV1-133*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022