PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1YC8

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	38.5	H1	13	H1-13-*	-1	AVSGSTYSPCTTG	BBBEBALBBBBBB
A	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	33.3	H2	9	H2-9-*	-1	SISSPGTIY	BBALALBBE
A	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	0.0	H3	12	H3-12-*	-1	QIQCGVrSIREY
A	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	38.5	H1	13	H1-13-*	-1	AVSGSTYSPCTTG	BBBLBABBBBBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	33.3	H2	9	H2-9-*	-1	SISSPGTIY	BBAEALBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	0.0	H3	12	H3-12-*	-1	QIQCgvRSIREY
B	heavy	Camelus.dromedarius	Ca_IGHV1S17*01	94.4	Ca_IGHV1S17*01	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022