PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1XIW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	6	RASQDIRNYLN	BBABBALLBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	5	YYTSRLHS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	6	QQGNTLPWT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	8	KASGYSFTGYTMN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	9	LINPYKGVST	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARSGYYgDSDWYFDV
D	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	90.9	L1	11	L1-11-2	6	RASQDIRNYLN	BBABBALLBBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	5	YYTSRLHS	BLLABBBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	7	QQGNTLPWT	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV10-96*01	98.6	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	6	GSGTDY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	8	KASGYSFTGYTMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	50.0	H2	10	H2-10-1	8	LINPYKGVST	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	100.0	H3	15	H3-15-*	-1	ARSGYYgDSDWYFDV
H	heavy	Mus.musculus	Mo_IGHV1-37*01	91.8	Mo_IGHV1-37*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022