PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1XF3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L1	11	L1-11-1	5	RASENIYSYLA	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L2	8	L2-8-1	7	YNAKTLAE	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L3	9	L3-9-cis7-1	29	QHHYGTPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L4	6	L4-6-1	5	GSGTQF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	100.0	H1	13	H1-13-1	11	KASGYTFTSYVMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	11	YINPYNDGTK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	50.0	H3	13	H3-13-*	-1	VRGGYRPYYAMDY	BBBBBBLALBBAB
B	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	7	SDKSSSTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	100.0	H1	13	H1-13-1	14	KASGYTFTSYVMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	10	YINPYNDGTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	50.0	H3	13	H3-13-*	-1	VRGGYRPYYAMDY	BBBBBAAAEEBAB
H	heavy	Mus.musculus	Mo_IGHV1-14*01	93.2	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	15	SDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L1	11	L1-11-1	5	RASENIYSYLA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L2	8	L2-8-1	6	YNAKTLAE	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L3	9	L3-9-cis7-1	26	QHHYGTPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-44*01	98.5	Mo_IGKV12-44*01	100.0	L4	6	L4-6-1	8	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022