PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1W72

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	8	AASGFTFDDYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	100.0	H2	10	H2-10-2	12	GISWNSGSIG	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	33.3	H3	15	H3-15-*	-1	ARGRGfHYYYYGMDI
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	8	AASGFTFDDYAMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	100.0	H2	10	H2-10-2	11	GISWNSGSIG	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	33.3	H3	15	H3-15-*	-1	ARGRGfHYYYYGMDI
I	heavy	Homo.sapiens	Hu_IGHV3-9*01	98.6	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	90.9	L1	11	L1-11-3	9	GGNNIGSRSVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	12	YDDSDRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-1	9	QVWDSRTDHWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	83.3	L4	6	L4-6-2	16	NSGNMA	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	90.9	L1	11	L1-11-3	9	GGNNIGSRSVH	BBBLAAABBBB
M	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	13	YDDSDRPS	BLEABBBB
M	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-1	9	QVWDSRTDHWV	BBBBAAALBBB
M	lambda	Homo.sapiens	Hu_IGLV3-21*02	98.5	Hu_IGLV3-21*02	83.3	L4	6	L4-6-2	17	NSGNMA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022