PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1VHP

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBBEAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBAAEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBEAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBAEAABLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBAAAEAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBAELABLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBBLLEAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBAABBBEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBAAEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBBLAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBAEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBEAEAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	BBBLEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBLAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBABAABBAA
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBBEAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	BBLAEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEAAAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBLAELBBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBLLEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBAELABLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEAABBAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBAEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBEAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBLELABLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEAABBAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBAAELBBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBLLEAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	BBELELBBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBLAEAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBAAELBBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEBEAEAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBBAELABLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEAAAEAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	BBAAEABBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEAABBAAAAEBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	BBBAEABELB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BEAABBAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	BBAAAABBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBAABBAAAAEEB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	90.0	H2	10	H2-10-*	-1	AVSGSGGSTY	BBBLLLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	10	H3-10-*	-1	ARLKKYAFDY	EBELELBBLB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBAAALEB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022