PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1VGE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	91.4	Hu_IGHV1-3*01	76.9	H1	13	H1-13-1	12	KASGYSFTSYGLH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	91.4	Hu_IGHV1-3*01	80.0	H2	10	H2-10-1	11	WISAGTGNTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	91.4	Hu_IGHV1-3*01	100.0	H3	14	H3-14-*	-1	ARDPYGGGKSEFDY	BBBAALALBBBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	91.4	Hu_IGHV1-3*01	87.5	H4	8	H4-8-1	9	RDTSATTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	92.4	Hu_IGKV1-13*02	100.0	L1	11	L1-11-1	6	RASQGISSALA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	92.4	Hu_IGKV1-13*02	87.5	L2	8	L2-8-1	5	YDASNLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	92.4	Hu_IGKV1-13*02	100.0	L3	9	L3-9-cis7-1	8	QQFNSYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	92.4	Hu_IGKV1-13*02	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022